Package: MixfMRI 0.1-4
MixfMRI: Mixture fMRI Clustering Analysis
Utilizing model-based clustering (unsupervised) for functional magnetic resonance imaging (fMRI) data. The developed methods (Chen and Maitra (2023) <doi:10.1002/hbm.26425>) include 2D and 3D clustering analyses (for p-values with voxel locations) and segmentation analyses (for p-values alone) for fMRI data where p-values indicate significant level of activation responding to stimulate of interesting. The analyses are mainly identifying active voxel/signal associated with normal brain behaviors. Analysis pipelines (R scripts) utilizing this package (see examples in 'inst/workflow/') is also implemented with high performance techniques.
Authors:
MixfMRI_0.1-4.tar.gz
MixfMRI_0.1-4.zip(r-4.5)MixfMRI_0.1-4.zip(r-4.4)MixfMRI_0.1-4.zip(r-4.3)
MixfMRI_0.1-4.tgz(r-4.4-x86_64)MixfMRI_0.1-4.tgz(r-4.4-arm64)MixfMRI_0.1-4.tgz(r-4.3-x86_64)MixfMRI_0.1-4.tgz(r-4.3-arm64)
MixfMRI_0.1-4.tar.gz(r-4.5-noble)MixfMRI_0.1-4.tar.gz(r-4.4-noble)
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MixfMRI.pdf |MixfMRI.html✨
MixfMRI/json (API)
# Install 'MixfMRI' in R: |
install.packages('MixfMRI', repos = c('https://snoweye.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/snoweye/mixfmri/issues
- .FC.CT - Sets of controls in MixfMRI
- pstats - Example datasets in MixfMRI
- pval.2d.complex - Example datasets in MixfMRI
- pval.2d.mag - Example datasets in MixfMRI
- shepp0fMRI - Example datasets in MixfMRI
- shepp1fMRI - Example datasets in MixfMRI
- shepp2fMRI - Example datasets in MixfMRI
- sheppAnat - Example datasets in MixfMRI
- toy1 - Example datasets in MixfMRI
- toy2 - Example datasets in MixfMRI
Last updated 1 months agofrom:192785df3b. Checks:OK: 5 NOTE: 4. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 16 2024 |
R-4.5-win-x86_64 | OK | Nov 16 2024 |
R-4.5-linux-x86_64 | OK | Nov 16 2024 |
R-4.4-win-x86_64 | OK | Nov 16 2024 |
R-4.4-mac-x86_64 | NOTE | Nov 16 2024 |
R-4.4-mac-aarch64 | NOTE | Nov 16 2024 |
R-4.3-win-x86_64 | OK | Nov 16 2024 |
R-4.3-mac-x86_64 | NOTE | Nov 16 2024 |
R-4.3-mac-aarch64 | NOTE | Nov 16 2024 |
Exports:apecma.step.gbdcba.corcba.cor.2dcba.cor.3dcluster.thresholdcov.logit.ETAcov.logit.zcov.paramcov.post.zdmixpvaldpvalEC.3Dem.step.gbdfclustfdr.bh.p1fdr.bh.p2gcv.smooth2dgendatasetinitial.em.gbdinitial.RndEM.gbdlmt.Ilmt.pvlogor.statlrtlrt.betaablrt.betameanlrt2my.alpha.appendmy.Redsmy.YlGnBumy.YlOrRdplotfclustplotfclustpvplotpvplotpvlegendpost.probqvalueset.globalsummarized.overlapThreshold.BonferroniThreshold.FDRThreshold.RF
Dependencies:EMClusterfftwlatticeMASSMatrixMixSimRColorBrewer